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- All Implemented Interfaces:
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org.veupathdb.lib.blast.serial.BlastField
@JvmInline() public final class SortHSPs implements BlastField
-sorthsps
<Integer, (>=0 and =<4)>Sorting option for HSPs:
0= Sort by hsp evalue1= Sort by hsp score2= Sort by hsp query start3= Sort by hsp percent identity4= Sort by hsp subject start
Not applicable for -outfmt !=
0
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Constructor Summary
Constructors Constructor Description SortHSPs(HSPSorting value)
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Method Summary
Modifier and Type Method Description BooleangetIsDefault()Indicates whether the field is currently set to its default value. StringgetName()The name of this field. final HSPSortinggetValue()UnitappendJson(ObjectNode js)Appends this field to the given JSON ObjectNode only if it is not set to its default value. UnitappendCliSegment(StringBuilder cli)Appends this field to the given StringBuilder only if it is not set to its default value. UnitappendCliParts(List<String> cli)Appends this field to the given MutableList only if it is not set to its default value. -
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Constructor Detail
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SortHSPs
SortHSPs(HSPSorting value)
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Method Detail
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getIsDefault
Boolean getIsDefault()
Indicates whether the field is currently set to its default value.
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getValue
final HSPSorting getValue()
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appendJson
Unit appendJson(ObjectNode js)
Appends this field to the given JSON ObjectNode only if it is not set to its default value.
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appendCliSegment
Unit appendCliSegment(StringBuilder cli)
Appends this field to the given StringBuilder only if it is not set to its default value.
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appendCliParts
Unit appendCliParts(List<String> cli)
Appends this field to the given MutableList only if it is not set to its default value.
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