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org.veupathdb.lib.blast.serial.BlastField
@JvmInline() public final class SortHits implements BlastField
-sorthits
<Integer, (>=0 and =<4)>Sorting option for hits.
Alignment view options:
0= Sort by evalue1= Sort by bit score2= Sort by total score3= Sort by percent identity4= Sort by query coverage
Not applicable for -outfmt
4
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Constructor Summary
Constructors Constructor Description SortHits(HitSorting value)
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Method Summary
Modifier and Type Method Description BooleangetIsDefault()Indicates whether the field is currently set to its default value. StringgetName()The name of this field. final HitSortinggetValue()UnitappendJson(ObjectNode js)Appends this field to the given JSON ObjectNode only if it is not set to its default value. UnitappendCliSegment(StringBuilder cli)Appends this field to the given StringBuilder only if it is not set to its default value. UnitappendCliParts(List<String> cli)Appends this field to the given MutableList only if it is not set to its default value. -
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Constructor Detail
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SortHits
SortHits(HitSorting value)
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Method Detail
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getIsDefault
Boolean getIsDefault()
Indicates whether the field is currently set to its default value.
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getValue
final HitSorting getValue()
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appendJson
Unit appendJson(ObjectNode js)
Appends this field to the given JSON ObjectNode only if it is not set to its default value.
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appendCliSegment
Unit appendCliSegment(StringBuilder cli)
Appends this field to the given StringBuilder only if it is not set to its default value.
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appendCliParts
Unit appendCliParts(List<String> cli)
Appends this field to the given MutableList only if it is not set to its default value.
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