MSAMasterIndex 6.0.0 API

All Implemented Interfaces:

org.veupathdb.lib.blast.serial.BlastField
```
@JvmInline() 
public final class MSAMasterIndex
 implements BlastField
                    
```
-msa_master_idx <Integer, >=1>
Ordinal number (1-based index) of the sequence to use as a master in the multiple sequence alignment. If not provided, the first sequence in the multiple sequence alignment will be used
Requires: -in_msa

Nested Class Summary

Nested Classes
Modifier and Type	Class	Description

Field Summary

Fields
Modifier and Type	Field	Description
`private final Boolean`	`isDefault`
`private final String`	`name`
`private final UInt`	`value`

Constructor Summary

Constructors
Constructor	Description
`MSAMasterIndex(UInt value)`

Enum Constant Summary

Enum Constants
Enum Constant	Description

Method Summary

Modifier and Type	Method	Description
`Boolean`	`getIsDefault()`	Indicates whether the field is currently set to its default value.
`String`	`getName()`	The name of this field.
`final UInt`	`getValue()`
`Unit`	`appendJson(ObjectNode js)`	Appends this field to the given JSON ObjectNode only if it is not set to its default value.
`Unit`	`appendCliSegment(StringBuilder cli)`	Appends this field to the given StringBuilder only if it is not set to its default value.
`Unit`	`appendCliParts(List<String> cli)`	Appends this field to the given MutableList only if it is not set to its default value.

Methods inherited from class org.veupathdb.lib.blast.psiblast.fields.MSAMasterIndex
toJson
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - MSAMasterIndex
```
MSAMasterIndex(UInt value)
```
- Method Detail
  - getIsDefault
```
 Boolean getIsDefault()
```
    Indicates whether the field is currently set to its default value.
  - getName
```
 String getName()
```
    The name of this field.
  - getValue
```
 final UInt getValue()
```
  - appendJson
```
 Unit appendJson(ObjectNode js)
```
    Appends this field to the given JSON ObjectNode only if it is not set to its default value.
  - appendCliSegment
```
 Unit appendCliSegment(StringBuilder cli)
```
    Appends this field to the given StringBuilder only if it is not set to its default value.
  - appendCliParts
```
 Unit appendCliParts(List<String> cli)
```
    Appends this field to the given MutableList only if it is not set to its default value.