diamondcli/org.veupathdb.lib.cli.diamond.opts.fields

Package-level declarations

Types

enum BenchmarkType : Enum<BenchmarkType> , CliSerializable

CompositionBasedStats

enum CompositionBasedStats : Enum<CompositionBasedStats> , CliSerializable

enum Compression : Enum<Compression> , CliSerializable

DistributionType

enum DistributionType : Enum<DistributionType> , CliSerializable

DNAExtensionAlgorithm

enum DNAExtensionAlgorithm : Enum<DNAExtensionAlgorithm> , CliSerializable

enum EdgeFormat : Enum<EdgeFormat> , CliSerializable

enum ExtensionMode : Enum<ExtensionMode> , CliSerializable

enum GraphAlgorithm : Enum<GraphAlgorithm> , CliSerializable

enum HeaderOption : Enum<HeaderOption>

enum InputType : Enum<InputType> , CliSerializable

enum MaskingMode : Enum<MaskingMode> , CliSerializable

data class MemoryLimit(val value: ULong) : CliSerializable

MotifMaskingAlgorithm

enum MotifMaskingAlgorithm : Enum<MotifMaskingAlgorithm> , CliSerializable

QueryFileFormat

enum QueryFileFormat : Enum<QueryFileFormat> , CliSerializable

enum QueryStrand : Enum<QueryStrand> , CliSerializable

value class RadixBits(rawValue: UByte) : CliSerializable

enum ScoreMatrix : Enum<ScoreMatrix> , CliSerializable

SeedSearchAlgorithm

enum SeedSearchAlgorithm : Enum<SeedSearchAlgorithm> , CliSerializable

enum Sensitivity : Enum<Sensitivity> , CliSerializable

enum SequenceType : Enum<SequenceType> , CliSerializable

SoftMaskingAlgorithm

enum SoftMaskingAlgorithm : Enum<SoftMaskingAlgorithm> , CliSerializable

TranslatorGenCode

enum TranslatorGenCode : Enum<TranslatorGenCode> , CliSerializable