blast-types/org.veupathdb.lib.blast.serial/BlastCommand

BlastCommand

interface BlastCommand

Blast Command Type Base

Functions

abstract fun toCliArray(): Array<String>

Converts the current BlastCommand to an array of strings making up a CLI call.

abstract fun toCliString(): String

Renders the current BlastCommand as a CLI call string.

abstract fun toJson(): ObjectNode

Serializes the current BlastCommand to a JSON ObjectNode.

abstract fun validate(): ErrorMap

Validates this Blast+ config checking for flags that are incompatible and values that are out of range or invalid.

Inheritors