diamondcli/org.veupathdb.lib.cli.diamond.opts/AlignerClusteringOptionContainer

AlignerClusteringOptionContainer

interface AlignerClusteringOptionContainer

Inheritors

Properties

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abstract var approxIdentity: Double?

Minimum approximate identity % to report an alignment/to cluster sequences.

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abstract var expectValue: Double?

Maximum e-value to report alignments.

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abstract var extensionMode: ExtensionMode?

Extension mode.

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abstract var motifMasking: MotifMaskingAlgorithm?

Softmask abundant motifs.