Package org.veupathdb.lib.blast.blastn.fields

Types

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value class BlastNTask(value: BlastNTaskType) : BlastField

-task <String>

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enum BlastNTaskType : Enum<BlastNTaskType>
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interface Dust : BlastField

-dust <String>

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value class FilteringDB(value: String) : BlastField

-filtering_db <String>

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value class IndexName(value: String) : BlastField

-index_name <String>

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value class MinRawGappedScore(value: Int) : BlastField

-min_raw_gapped_score <Integer>

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value class NonGreedy(value: Boolean) : BlastField

-no_greedy

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value class OffDiagonalRange(value: UInt) : BlastField

-off_diagonal_range <Integer, >=0>

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value class Penalty(value: Int) : BlastField

-penalty <Integer, <=0>

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value class PercentIdentity(value: Double) : BlastField

-perc_identity <Real, 0..100>

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value class Reward(value: UInt) : BlastField

-reward <Integer, >=0>

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value class SoftMaskingN(value: Boolean) : BlastField

-soft_masking <Boolean>

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value class TemplateLength(value: TemplateLengthValue) : BlastField

-template_length <Integer>

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enum TemplateLengthValue : Enum<TemplateLengthValue>
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value class TemplateType(value: TemplateTypeType) : BlastField

-template_type <String>

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enum TemplateTypeType : Enum<TemplateTypeType>
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value class UseIndex(value: Boolean) : BlastField

-use_index <Boolean>

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value class WindowMaskerDB(file: String) : BlastField

-window_masker_db <String>

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value class WindowMaskerTaxID(value: Int) : BlastField

-window_masker_taxid <Integer>