SaveEachPSSM

value class SaveEachPSSM(value: Boolean) : BlastField

-save_each_pssm

Save PSSM after each iteration (file name is given in -save_pssm or -save_ascii_pssm options)

Constructors

Link copied to clipboard
fun SaveEachPSSM(value: Boolean = false)

Functions

Link copied to clipboard
open override fun appendCliParts(cli: MutableList<String>)

Appends this field to the given MutableList only if it is not set to its default value.

Link copied to clipboard
open override fun appendCliSegment(cli: StringBuilder)

Appends this field to the given StringBuilder only if it is not set to its default value.

Link copied to clipboard
open override fun appendJson(js: ObjectNode)

Appends this field to the given JSON ObjectNode only if it is not set to its default value.

Link copied to clipboard
open fun toJson(): ObjectNode

Serializes this field into a JSON ObjectNode.

Properties

Link copied to clipboard
open override val isDefault: Boolean

Indicates whether the field is currently set to its default value.

Link copied to clipboard
open override val name: String

The name of this field.

Link copied to clipboard
val value: Boolean = false