blast-types/org.veupathdb.lib.blast.deltablast.fields

Package org.veupathdb.lib.blast.deltablast.fields

Types

CompBasedStatsDelta

value class CompBasedStatsDelta(value: CompBasedStatsDeltaValue) : BlastField

-comp_based_stats <String>

CompBasedStatsDeltaValue

enum CompBasedStatsDeltaValue : Enum<CompBasedStatsDeltaValue>

DomainInclusionEValueThreshold

value class DomainInclusionEValueThreshold(value: Double) : BlastField

-domain_inclusion_ethresh <Real>

value class MatrixDelta(value: MatrixDeltaType) : BlastField

-matrix <String>

MatrixDeltaType

enum MatrixDeltaType : Enum<MatrixDeltaType>

value class RPSDB(value: String) : BlastField

-rpsdb <String>

interface SegDelta : Seg

value class ShowDomainHits(value: Boolean) : BlastField

-show_domain_hits

SoftMaskingDelta

value class SoftMaskingDelta(value: Boolean) : BlastField

-soft_masking <Boolean>

value class WordSizeDelta(value: UInt) : BlastField

-word_size <Integer, >=2>